Genome Sequences of Three Pseudoalteromonas Strains (P1-8, P1-11, and P1-30), Isolated from the Marine Hydroid Hydractinia echinata.
2015
J Clardy,
M Rischer,
H Guo,
E Shelest,
T Wolf,
C Beemelmanns,
Jonathan L Klassen
Research Type: Journal Article
Getting the hologenome concept right: an eco-evolutionary framework for hosts and their microbiomes
2016
Jan Sapp,
Scott F Gilbert,
Ilana Zilber-Rosenberg,
Seth R Bordenstein,
Elisabeth A Lloyd,
Jonathan L Klassen,
Thomas CG Bosch,
Nolwenn M Dheilly,
Eugene Rosenberg,
Philippe Vandenkoornhuyse,
Robert M Brucker,
Charles J Goodnight,
Kevin R Theis,
John F Baines,
John F Cryan
Research Type: Journal Article
High-Quality Draft Genome Sequences of Eight Bacteria Isolated from Fungus Gardens Grown by Trachymyrmex septentrionalis Ants
2018
Hannah Beatty,
Manoj Pillay,
Jonathan L Klassen,
Dimitrios Stamatis,
Natalia Ivanova,
Nikos Kyrpides,
Natalia Mikhailova,
Philip Gialopsos,
Krishnaveni Palaniappan,
Neha Varghese,
Alicia Clum,
Tanja Woyke,
Chris Daum,
Marcel Huntemann,
TBK Reddy,
Vivian Ng,
Alexander Spunde,
Sarah Kopac
Research Type: Journal Article
Isolation, Biosynthesis and Chemical Modifications of Rubterolones A-F, Rare Tropolone Alkaloids from Actinomadura sp. 5-2.
2017
H Görls,
Z W de Beer,
C Beemelmanns,
D Leichnitz,
H Guo,
A K Kaster,
R Benndorf,
C Weigel,
M Steinacker,
H M Dahse,
M Poulsen,
J Vollmers,
Jonathan L Klassen
Research Type: Journal Article
It Takes a Village: Community Interactions in the Fungus-Growing Ant Symbiosis
2015
Jonathan L Klassen
Research Type: Poster/Presentation
Keeping it fresh
2019
Jonathan L Klassen
Research Type: Journal Article
Linear Peptides Are the Major Products of a Biosynthetic Pathway That Encodes for Cyclic Depsipeptides
2017
Shugeng Cao,
Thomas P Wyche,
Christine Beemelmanns,
Ki Hyun Kim,
Antonio C Ruzzini,
Jon Clardy,
Michael Poulsen,
Tim S Bugni,
Cameron R Currie,
Jonathan L Klassen
Research Type: Journal Article
MASST: A Web-based Basic Mass Spectrometry Search Tool for Molecules to Search
Public Data
2019
Fernando Vargas,
Justin JJ van der Hooft,
Morgan Panitchpakdi,
Lara Labarta-Bajo,
Kathleen E Kyle,
Jaramie D Watrous,
Carolina S Carpenter,
Daniel Petras,
Emily C Gentry,
Mingxun Wang,
Elina I Zuniga,
Elizabeth Brown,
Emmanuel O Elijah,
Jonathan L Klassen,
Louis Felix Nothias,
Julia M Gauglitz,
Sara P Puckett,
Shabnam Shalapour,
Andres Mauricio Caraballo Rodriguez,
Austin D Swafford,
Kelly Weldon,
Rohit Loomba,
Robby Quinn,
Nicole Sikora,
Madeleine Ernst,
Rob Knight,
Francesca Di Ottavio,
Bandeira Nuno,
Christine M Aceves,
Alan K Jar,
Alexander A Aksenov,
Ricardo da Silva,
Alexey V Melnik,
Amina Bouslimani,
Marcy J Balunas,
Pieter C Dorrestein
Research Type: Journal Article
Macrotermycin A-G, glycosylated macrolactams from a termite-associated Amycolatopsis sp. M39
2017
Christine Beemelmanns,
Jon Clardy,
Ki Hyun Kim,
Shugeng Cao,
Jonathan L Klassen,
Michael Poulsen,
Timothy R Ramadhar,
Tim S Bugni,
Yanpeng Hou,
Cameron R Currie,
Thomas P Wyche
Research Type: Journal Article
Mass spectrometry searches using MASST.
2020
F Di Ottavio,
S P Puckett,
P C Dorrestein,
E Brown,
M Wang,
R Loomba,
A K Jarmusch,
M Panitchpakdi,
F Vargas,
J D Watrous,
A M Caraballo-Rodríguez,
L Labarta-Bajo,
K E Kyle,
E O Elijah,
C M Aceves,
S Shalapour,
A Bouslimani,
E I Zúñiga,
N Bandeira,
Jonathan L Klassen,
R Knight,
M Ernst,
C S Carpenter,
E C Gentry,
J M Gauglitz,
D Petras,
N Sikora,
A A Aksenov,
Marcy J Balunas,
K Weldon,
A D Swafford,
L F Nothias,
A V Melnik,
R da Silva,
R Quinn
Research Type: Journal Article
Microbial Secondary Metabolites and their Impacts on Insect Symbioses
2014
Jonathan L Klassen
Research Type: Journal Article
Molecular interaction networks in the model fungus-growing ant microbiome
2014
Jonathan L Klassen
Research Type: Poster/Presentation
Propagating annotations on molecular networks using in silico fragmentation
2018
Pieter C Dorrestein,
Justin JJ van der Hooft,
Andres Mauricio Caraballo-Rodriguez,
Norberto Peporine Lopes,
Mingxun Wang,
Marcy J Balunas,
Jonathan L Klassen,
Ricardo R da Silva,
Louis-Felix Nothias,
Evan Fox
Research Type: Journal Article
Subgroups in the Ralstonia solanacearum species complex use divergent 3 respiratory strategies to grow in tomato xylem
Jonathan L Klassen,
Robert Anex,
Bradon McDonald,
Tiffany Lowe-Power,
Beth L Dalsing,
Caitilyn Allen,
Alicia N Truchon,
Devanshi Khokhani,
Florent Ailloud,
Philippe Prior,
Cameron Currie,
April MacIntyre,
Enid T Gonzalez-Ortaz
Research Type: Journal Article
The Microbial Diversity of Fungus-Growing Ant Fungus Gardens
2014
Jonathan L Klassen
Research Type: Poster/Presentation
The antimicrobial potential of Streptomyces from insect microbiomes
2019
Chris Thomas,
Weilan GP Melo,
Heidi A Horn,
Jonathan L Klassen,
William Flanigan,
Gene E Ananiev,
Adrian A Pinto-Tomas,
Fan Zhang,
Tim S Bugni,
F Michael Hoffman,
Gina R Lewin,
Caitlin M Carlson,
Adam J Book,
Amber Schmitz,
Kirk J Grubbs,
Evelyn Wendt-Penkowski,
Miao Zhao,
David R Andes,
Monica T Pupo,
Camila Carlos,
Kenneth J Barns,
Scott Wildman,
Laura Muller,
Bradon R McDonald,
Cameron R Currie,
Jennifer J Knack,
Marc G Chevrette,
Humberto E Ortega,
Julian Cagnazzo
Research Type: Journal Article
The microbial community ecology of fungus-growing ants
2014
Jonathan L Klassen
Research Type: Poster/Presentation
The minimum information about a biosynthetic gene cluster (MIBiG) specification
2015
Rene De Mot,
Andriy Lyzhetskyy,
Bradley S Moore,
Leonilde M Moreira,
Carla S Jones,
Anne Osbourn,
Adam C Jones,
Jean-Luc Pernodet,
Olivier Ploux,
Jos M Raaijmakers,
Christoph Geiger,
Barry Scott,
Jon Clardy,
Muriel Viaud,
Amrita Pati,
Zhenhua Tian,
Xiaohui Yan,
Yunchang Xie,
Irene de Bruijn,
Taifo Mahmud,
Gerry Wright,
Wilfred van der Donk,
Pieter C Dorrestein,
Oscar Kuipers,
Hyun Uk Kim,
Carsten Kegler,
Renzo Kottmann,
Rob Lavigne,
Chia Lee,
Jose A Salas,
Ben Shen,
David Sherman,
Nikos Kyrpides,
Sergy Zotchev,
Tomohisa Kuzuyama,
Nancy P Keller,
Elizabeth Wyckoff,
Bertolt Gust,
Carmen Mendez,
Joanne Willey,
Barrie Wilkinson,
Yi Tang,
Roderich Sussmuth,
Grace Yim,
Jonathan L Klassen,
Markus Nett,
Bertrand Aigle,
Hideaki Oikawa,
Axel Brakhage,
Esther K Schmitt,
Alexander K Apel,
Emily Balskus,
Carl J Balibar,
Marnix H Medema,
Marcus Moore,
Frank Oliver Glockner,
Miroslav Petricek,
Guohui Pan,
Margherita Sosio,
Hyung-Jin Kwon,
Kaarina Sivonen,
Bohdan Ostash,
Jens Nielsen,
Anthony S Haines,
Douglas Mitchell,
Wen Liu,
Christian Hertweck,
Michael A Fischbach,
Xinyu Liu,
Sean Doyle,
Bai Linquan,
Philipp Wiemann,
Alexey V Melnik,
David P Fewer,
Mikko Metsa-Ketela,
Yi-Qiang Cheng,
Katrin Jungmann,
Lena Gerwick,
Gilles van Wezel,
Leonard Katz,
Federico Rosconi,
Nicholas J Tobias,
Pelin Yilmaz,
Simone M Mantovani,
Pablo Cruz-Morales,
Juan Pablo Gomez-Escribano,
Mohamed S Donia,
Jonathan Walton,
Anja Greule,
Jan Kormanec,
Yuta Tsunematsu,
Arnold Driessen,
Stefano Donadio,
R Cameron Coates,
Wolfgang Wohlleben,
Rainer Borriss,
Nadine Ziemert,
Tilmann Weber,
Neha Garg,
Nathan Moss,
Yit Heng Chooi,
Fengan Yu,
Jerry Reen,
Daniel Petras,
Francisco Barona-Gomez,
Monika Ehling-Schulz,
Hans-Wilhelm Nutzmann,
Kapil Tahlan,
Harald Gross,
Monica Hofte,
Michael Smanski,
Keishi Ishida,
Sylvie Lautru,
Ryan F Seipke,
Rainer Breitling,
Helge B Bode,
Eric J N Helfrich,
Christopher M Thomas,
Shelley Payne,
Brett Neilan,
Jan Claesen,
Srikanth Duddela,
Stephanie Duesterhus,
Yvonne Mast,
Leonard Kaysser,
Peter Koetter,
Jianhua Ju,
Daniel Edwards,
Emilie Monroe,
Eriko Takano,
Susan Jensen,
Karl-Dieter Entian,
Andreas Bechthold,
Christopher T Walsh,
Andrew W Truman,
Zhe Rui,
Jorn Piel,
Marcia Osburne,
Fergal O'Gara,
Rolf Muller,
William H Gerwick,
Russell Cox,
Patrick Caffrey,
Matthew Cummings,
John Biggins,
Michalis Hadjithomas,
Daniel Krug,
Joleen Masschelein,
Changsheng Zhang,
Sean Brady
Research Type: Journal Article
Xenorhabdus bovienii bacterial strain diversity impacts coevolution and symbiotic maintenance with Steinernema spp. nematode hosts
2015
Cameron R Currie,
Jonathan L Klassen,
Bret Larget,
Heidi Goodrich-Blair,
Kristen E Murfin,
Ming-Min Lee,
Bradon R McDonald,
Steven Forst,
S Patricia Stock
Research Type: Journal Article