Rachel J. O'neill
Director & Distinguished Professor/Systems Genomics Institute

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Scholarly Contributions

93 Scholarly Contributions

52
Journal Articles
36
Poster/Presentations
2
Other Scholarly Works
2
Conference Proceedings
1
Book Chapter
Salpa genome and developmental transcriptome analyses reveal molecular flexibility enabling reproductive success in a rapidly changing environmentScientific Reports
2023
Ann Bucklin, Paola Batta Lona, Rachel J O'Neill, Kate R Castellano
Research Type: Journal Article

Centromere Repeats: Hidden gems of the genome
2019
Gabrielle Hartley, Rachel J O'Neill
Research Type: Journal Article

A centromere satellite concomitant with extensive karyotypic diversity across the Peromyscus genus defies predictions of molecular drive.
2019
B M Smalec, Rachel J O'Neill, T N Heider, B L Flynn
Research Type: Journal Article

Dosage Compensation and Gene Expression of the X Chromosome in Sheep
2019
S Pillai, Rachel J O'Neill, K Flock, J Duan, Xiuchun Tian, H Jiang, Sarah A Reed, Maria Hoffman, Ion I Mandoiu, Steven Zinn, N Jue, Kristen Govoni, S Seesi, A Jones, M Zhang, Z Jiang
Research Type: Journal Article

FURIN variant associations with postexercise hypotension are intensity and race dependent.
2019
Gregory A Panza, A Zaleski, Ming-Hui Chen, Beth A Taylor, Rachel J O'Neill, V Deshpande, Burak T Chilhoroz, Linda S Pescatello, L Corso, Elizabeth Schifano
Research Type: Journal Article

Dosage Compensation of the X Chromosomes in Bovine Germline, Early Embryos and Somatic Tissues
2019
Rachel J O'Neill, N Jue, X Zheng, E Wolf, Xiuchun Tian, H Dong, J Duan, W Shi, J Chen, Z Jiang, Lynn Kuo
Research Type: Journal Article

Deep-targeted sequencing of endothelial nitric oxide synthase gene exons uncovers exercise intensity and ethnicity dependent associations with postexercise hypotension.
2018
V Deshpande, Elizabeth Schifano, Amanda Zaleski, Linda S Pescatello, Ming-Hui Chen, Rachel J O'Neill, Beth A Taylor, Greg Panza
Research Type: Journal Article

Transposable elements: genome innovation, chromosome diversity, and centromere conflict.
2018
S J Klein, Rachel J O'Neill
Research Type: Journal Article

An Updated Genetic Map of Peromyscus with Chromosomal Assignment of Linkage Groups
2018
Julianna Crivello, Rachel J O'Neill, Judith D Brown
Research Type: Journal Article

Adaptation and conservation insights from the koala genome.
2018
A K Gillett, M Govendir, M Hobbs, G J Frankham, K M Morris, J E Deakin, P A Brandies, T L Russell, R N Johnson, S Dennison, Z Chen, W J Nash, K Belov, W Haerty, K M Ewart, P Timms, L E Neaves, C J Hogg, A D Greenwood, R Salinas, T N Heider, A Polkinghorne, Y Cheng, E Peel, K Tsangaras, C E Grueber, A King, G J Etherington, J G Bragg, H R Patel, V Attenbrow, D O'Meally, D Colgan, A Y Chong, Z Duda, C Robin, Rachel J O'Neill, A Georges, K M Helgen, E A Jones, S A Waters, C M Whittington, D E Alquezar-Planas, B Wright, C E Holleley, F Di Palma, T Hayakawa, D Madden, M R Wilkins, M B Renfree, P D Waters
Research Type: Journal Article

Replication timing kept in LINE.
2018
Michael J O'Neill, Rachel J O'Neill
Research Type: Journal Article

Tissue-Specific Transcriptome for Poeciliopsisprolifica Reveals Evidence for Genetic Adaptation Related to the Evolution of a Placental Fish.
2018
R J Foley, Rachel J O'Neill, N K Jue, D N Reznick, Michael J O'Neill
Research Type: Journal Article

Epigenetic maintenance of topological domains in the highly rearranged gibbon genome.
2018
N H Lazar, K A Nevonen, T J Meyer, Rachel J O'Neill, L Carbone, B O'Connell, M Okhovat, R E Green, C McCann
Research Type: Journal Article

Continuous-trait probabilistic model for comparing multi-species functional genomic data
2018
Rachel J O'Neill, Julianna Crivello
Research Type: Journal Article

Sex chromosome repeats tip the balance towards speciation
2018
Michael J O'Neill, Rachel J O'Neill
Research Type: Journal Article

Sex chromosome repeats tip the balance towards speciation.
2018
Michael J O'Neill, Rachel J O'Neill
Research Type: Journal Article

Genome of the Tasmanian tiger provides insights into the evolution and demography of an extinct marsupial carnivore.
2018
J Soubrier, C Y Feigin, T N Heider, B Llamas, J Schmitz, K J Mitchell, G Gower, Rachel J O'Neill, A H Newton, C A Hipsley, B R Menzies, Andrew J Pask, A Cooper, L Doronina
Research Type: Journal Article

Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife.
2017
S Ginzburg, P Michalak, J P Velotta, Stephen Mccormick, Eric T Schultz, Jill Wegrzyn, S Czesny, Rachel J O'Neill, L Kang
Research Type: Journal Article

Deep-targeted sequencing of endothelial nitric oxide synthase gene exons uncovers exercise intensity and ethnicity-dependent associations with post-exercise hypotension.
2017
G I Ash, P D Thompson, B Cilhoroz, Ming-Hui Chen, Beth A Taylor, G A Panza, Rachel J O'Neill, V Deshpande, Linda S Pescatello, A Zaleski, P Farinatti, Elizabeth Schifano
Research Type: Journal Article

Transcriptomic profiles of spring and summer populations of the Southern Ocean salp, Salpa thompsoni, in the Western Antarctic Peninsula region
2017
Rachel J O'Neill, Maas AE, Batta-Lona PG, Wiebe PH, Ann Bucklin
Research Type: Journal Article