Yufeng Wu
Professor/Computing

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Scholarly Contributions

87 Scholarly Contributions

42
Journal Articles
32
Poster/Presentations
8
Conference Proceedings
3
Other Scholarly Works
2
Books
HPV-EM: an accurate HPV detection and genotyping EM algorithm
2020
Jin Zhang, Julie K. Schwarz, Michael D. McLellan, Yufeng Wu, Akinyemi I. Ojesina, Yufeng Wu, Matthew J. Inkman, Thomas M. Ellis, Fiona Ruiz, Kay Jayachandran
Research Type: Journal Article

InvBFM: Finding Genomic Inversions from High-throughput Sequence Data based on Feature Mining
2020
Yufeng Wu, Jingyang Gao, Zhongjia Wu
Research Type: Journal Article

Detecting Circular RNA from High-throughput Sequence Data with De Bruijn Graph
2020
Yufeng Wu, Xin Li
Research Type: Journal Article

Accurate and Efficient Cell Lineage Tree Inference from Noisy Single Cell Data: the Maximum Likelihood Perfect Phylogeny Approach
2020
Yufeng Wu
Research Type: Journal Article

Inferring the ancestry of parents and grandparents from genetic data
2020
Yufeng Wu, Rasmus Nielsen, Yiming Zhang, Jingwen Pei
Research Type: Journal Article

Computational Approaches for the Inference of Phylogenetic Network
2021
Yufeng Wu
Research Type: Poster/Presentation

Alterations of host-gut microbiome interactions in multiple sclerosis
2022
Hang Xiao, Li Deng, Zhongmao Liu, Claudia Cantoni, Kun Chen, Amber Salter, Amy Lovett-Racke, Pamela Newland, Anne H Cross, Kathleen Obert, Alberto Locca, Cassandra Suther, Suresh Bokoliya, Matthew Gormley, Laura Piccio, Laura Ghezzi, Phillip I Tarr, Qingqi Lin, Yanhui Han, Yue Liu, Yeming Pan, Emily Evans, Zhengze Li, Yair Dorsett, Hunter Panier, Robert Mikesell, Yanjiao Zhou, Yufeng Wu
Research Type: Journal Article

Joint Inference of Ancestry and Genotypes of Parents from a Small Number of Children
2022
Yiming Zhang, Yufeng Wu
Research Type: Journal Article

Cardiometabolic Biomarkers and Habitual Caffeine Consumption Associate with the Adverse Ambulatory Blood Pressure Response to Strenuous Physical Exertion among Firefighters.
2022
A B Fernandez, Ming-Hui Chen, Yufeng Wu, A L Zaleski, Beth A Taylor, P M Parducci, Yi Zhang, K M Gans, Linda S Pescatello, R S Berkowsky
Research Type: Journal Article

Can a set of trees be displayed in a tree-child network simultaneously?
2022
Yufeng Wu
Research Type: Poster/Presentation

Probability Computation for Trees and Networks Under Coalescent Theory
2022
Yufeng Wu
Research Type: Poster/Presentation

Detecting genomic deletions from high-throughput sequence data with unsupervised learning
2023
Yufeng Wu, Xin Li
Research Type: Journal Article

Algorithms for Inferring the Ancestry of an Admixed Individual
2023
Yufeng Wu
Research Type: Poster/Presentation

A Synchronization Detection Approach for Identifying Rare Mutations underlying Common Disease
2024
Yanqin Liu, Jiayin Wang, Jin Zhang, Xuanping Zhang, Yufeng Wu
Research Type: Conference Proceedings

scSNVIndel. accurate and efficient calling of SNVs and indels from single cell sequencing using integrated Bi-LSTM
2024
Yufeng Wu, Jingyang Gao, Lei Cai
Research Type: Conference Proceedings

Concod: Accurate consensus-based approach of calling deletions from high-throughput sequencing data
2024
Xiaodong Zhang, Yao Zhang, Jingyang Gao, Yufeng Wu, Chong Chu
Research Type: Conference Proceedings

A general approach for inferring the ancestry of ancestors of an admixed individual
2024
Haotian Zhang, Yiming Zhang, Yufeng Wu
Research Type: Journal Article

Computing the Bounds of the Number of Reticulations in a Tree-Child Network That Displays a Set of Trees
2024
Yufeng Wu, Louxin Zhan
Research Type: Journal Article

Meta-analysis identifies common gut microbiota associated with multiple sclerosis
2024
Qingqi Lin, Kun Chen, Ali Mirza, Laura Piccio, David A. Hafler, Erin E. Longbrake, Howard L. Weiner, Laura M. Cox, Helen Tremlett, Yufeng Wu, Takashi Yamamura, Yanjiao Zhou, Siobhan Ni Choileain, Yair Dorsett
Research Type: Journal Article

https://doi.org/10.1186/s13073-024-01364-x
A general approach for inferring the ancestry of recent ancestors of an admixed individual
2024
Yufeng Wu, Haotian Zhang, Yiming Zhang
Research Type: Poster/Presentation