Yuping Zhang
Associate Professor/Statistics

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Scholarly Contributions

64 Scholarly Contributions

25
Poster/Presentations
25
Journal Articles
9
Technologys
3
Conference Proceedings
2
Book Chapters
Online Updating of Survival Analysis in the Big Data Setting
2018
Jun Yan, Yuping Zhang, Elizabeth Schifano, Ming-Hui Chen, Jing Wu
Research Type: Poster/Presentation

PATH: An interactive web platform for analysis of time-course high-dimensional genomic data
2019
Yang Chen, Yuping Zhang, Zhengqing Ouyang
Research Type: Technology

https://sites.google.com/site/statyuping/software/path
PEAT, Protein Expression through Adaptive Thresholding, developed in R
2020
Yuping Zhang
Research Type: Technology

PRAS: Predicting functional targets of RNA binding proteins based on CLIP-seq peaks
2019
Jianan Lin, Yuping Zhang, Wayne N. Frankel, Zhengqing Ouyang
Research Type: Journal Article

PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine
Hongfang Liu, Casey Greene, Rikke Linnemann Nielsen, Graciela Graciela, Aditya Kashyap, Zhengqing Ouyang, Jaclyn Taroni, Jingcheng Du, Davy Weissenbacher, Zhiyong lu, Sebastian Schaaf, Yong Chen, Mary Regina Boland, Juliane Fluck, Cui Tao, John Holmes, Yuping Zhang, Robert Leaman
Research Type: Conference Proceedings

PSB 2019 workshop on text mining and visualization for precision medicine
John Holmes, Jaclyn N. Taroni, Yuping Zhang, Yong Chen, Davy Weissenbacher, Casey S. Greene, Aditya Kashyap, Cui Tao, Sebastian Schaaf, Graciela Gonzalez-Hernandez, Juliane Fluck, Mary Regina Boland, Rikke Linnemann Nielsen, Robert Leaman, Hongfang Liu, Zhengqing Ouyang, Zhiyong Lu, Jingcheng Du
Research Type: Conference Proceedings

Pathway analysis of breast cancer subtypes integrating DNA methylation, copy number variation, and gene expression
2019
Henry Linder, Yuping Zhang
Research Type: Technology

https://zhang-lab.shinyapps.io/pathway-analysis-missing-data/
Predicting Quantitative Outcomes of Patients Using Longitudinal Gene Expression
2014
Yuping Zhang, Zhengqing Ouyang
Research Type: Journal Article

Predicting patient survival from longitudinal gene expression
2010
Yuping Zhang, Robert J Tibshirani, Ronald W Davis
Research Type: Journal Article

Principal trend analysis for time-course data with applications in genomic medicine
2013
Ronald Davis, Yuping Zhang
Research Type: Journal Article

STAT3 targets suggest mechanisms of aggressive tumorigenesis in diffuse large B-cell lymphoma
2013
Yuping Zhang, Philippe Lacroute, Zhengqing Ouyang, Anshul Kundaje, Michael Snyder, Jennifer Hardee
Research Type: Journal Article

Statistical learning and data science lab
2016
Yuping Zhang
Research Type: Poster/Presentation

Statistical learning and inference for biological networks
2020
Yuping Zhang
Research Type: Poster/Presentation

Statistical learning for biomedical data integration and analysis
2018
Yuping Zhang
Research Type: Poster/Presentation

Statistical learning for data integration with applications in omics studies
2014
Yuping Zhang
Research Type: Poster/Presentation

Statistical modeling for 3D structure reconstruction from genome-wide chromatin conformation capturing data
2017
Yuping Zhang, Zhengqing Ouyang, Chenchen Zou
Research Type: Poster/Presentation

Stochastic model of coliphage lambda regulatory network
2006
Yuping Zhang, Siyuan Wang, Qi Ouyang
Research Type: Journal Article

Stochastic model of yeast cell-cycle network
2006
Minping Qian, Yuping Zhang, Fangting Li, Minghua Deng, Qi Ouyang, Chao Tang
Research Type: Journal Article

TPAM: classification prediction by Time-course Prediction Analysis for Microarrays
2013
Yuping Zhang
Research Type: Technology

https://sites.google.com/site/statyuping/software/tpam
TSPC: survival analysis by Time-course Supervised Principal Components
2010
Yuping Zhang
Research Type: Technology

https://sites.google.com/site/statyuping/software/tspc