Derek Cole Aguiar
Associate Professor/Computing

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Scholarly Contributions

60 Scholarly Contributions

20
Journal Articles
16
Conference Proceedings
13
Poster/Presentations
6
Other Scholarly Works
3
Teaching Materialss
2
Book Chapters
Machine Learning, Genomics, Transcriptomics, Bash and R Tutorial
2022
Derek C Aguiar
Research Type: Poster/Presentation

Life after Grad School
2021
Derek C Aguiar
Research Type: Poster/Presentation

Interpretable fake news detection with topic and deep variational models
2023
Alireza Javadian Sabet, Suining He, Marjan Hosseini, Derek Aguiar
Research Type: Journal Article

Interpretable Fake News Detection with Topic and Deep Variational Models
Marjan Hosseini, Alireza Javadian Sabet, Derek C Aguiar, Suining He
Research Type: Journal Article

Improving Opioid Use Disorder Risk Modelling through Behavioral and Genetic Feature Integration
Devin McConnell, Sybille Legitime, Derek C Aguiar, Kaustubh Prabhu, Bing Wang, Dipak Dey
Research Type: Conference Proceedings

Haplotype phasing by multi-assembly of shared haplotypes: phase-dependent interactions between rare variants
2011
Bjarni V Halld\'orsson$^*$, Derek Aguiar$^*$, Sorin Istrail
Research Type: Book Chapter

Haplotype assembly in polyploid genomes and identical by descent shared tracts
2013
Sorin Istrail, Derek Aguiar
Research Type: Journal Article

Haplotype Assembly and Phasing Unification
2023
Derek Aguiar, Marjan Hosseini
Research Type: Other Scholarly Work

HapCompass: fast cycle basis algorithms for accurate diploid and polyploid haplotype assembly
2016
Sorin Istrail, Derek Aguiar
Research Type: Teaching Materials

HapCompass: a fast cycle basis algorithm for accurate haplotype assembly of sequence data
2012
Derek Aguiar, Sorin Istrail
Research Type: Journal Article

Genome-wide algorithms for haplotype assembly, haplotype phasing, and IBD inference
2014
Derek Aguiar
Research Type: Other Scholarly Work

GBSD: Generative Bokeh with Stage Diffusion
Derek C Aguiar, Jieren Deng
Research Type: Conference Proceedings

Evaluating molecular fingerprint-based models of drug side effects against a statistical control
2022
Mark Gosink, Berk A Alpay, Derek Aguiar
Research Type: Journal Article

Drug side effect prediction models benefit only marginally from chemical fingerprints
2022
Berk Alpay, Mark Gosink, Derek C Aguiar
Research Type: Journal Article

Distilling Adversarial Robustness Using Heterogeneous Teachers
2025
Rigel Mahmood, Derek C Aguiar, Jinbo Bi, Ethan Rathbun, Kaleel Mahmood, Aaron Palmer, Jieren Deng
Research Type: Conference Proceedings

Differentially methylated regions and methylation QTLs for teen depression and early puberty in the Fragile Families Child Wellbeing Study
2021
others, Jordana Bell, Archit Verma, Vito, Roberta De, Lisa M Schneper, Isabella N Grabski, Daniel A Notterman, Colter Mitchell, Derek Aguiar, Sara McLanahan, Juan Castillo Fernandez
Research Type: Journal Article

Deep statistical modelling of nanopore sequencing translocation times reveals latent non-B DNA structures
2023
Venkata Patchigolla, Patrick GS Grady, Zhiyi Chi, Aaron Palmer, Jinbo Bi, Rachel J O'Neill, Marjan Hosseini, William Manka, Derek C Aguiar
Research Type: Conference Proceedings

Deep statistical modelling of nanopore sequencing reveals latent non-B DNA structures
2023
Derek C Aguiar
Research Type: Poster/Presentation

DELISHUS: an efficient and exact algorithm for genome-wide detection of deletion polymorphism in autism
2012
Derek Aguiar, Bjarni V Halld\'orsson, Eric M Morrow, Sorin Istrail
Research Type: Journal Article

Curriculum Design and Improvement: Integrating AI Concepts and Societal Problems in a Secondary Science Module.
2024
Yue Bai, J Corricelli, Megan Staples, S Legitime, David Campbell, Derek Cole Aguiar
Research Type: Poster/Presentation